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OmicsBox Update Version 1.3

OmicsBox Update Version 1.3

We are happy to announce that the OmicsBox Update Version 1.3 has now been released. OmicsBox provides now Long-Read support for DNA-Seq data analysis pipelines. Several new tools and updates improve the transcriptomics module and a new statistical package in the Metagenomics Module allow to identify functional differences among microbiome samples.

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OmicsBox Video Introduction

This 5-minute video provides a brief introduction to OmicsBox. All main features of all modules are introduced. OmicsBox is a bioinformatics Solution to easy your Omcis Data Analysis. Our workflows get you  from raw reads tp insights fast and easy.  The presented modules include Transcriptomics, Functional Annotation and Analysis with Blast2GO, the Genome Analysis Module as well as the Metagenomics

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BioBam at the BioIT April 2019

Last April, the BioBam Team attended the Bio-IT World Conference & Expo in Boston and launched OmicsBox v.1.0. OmicsBox is BioBam’s latest offering, a bioinformatics software solution for the analysis of NGS data for different omics applications. OmicsBox provides four modules: The Functional Analysis module which includes the popular Blast2GO Functional Annotation software – BioBam’s flagship for functional genomics studies.

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Interview with Mariana Monteiro

Interview with Mariana Monteiro, a Bioinformatician, Sales and Customer Manager at BioBam. What I value the most about BioBam is that it is a very human company very close to its employees.

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BioBam at PAG January 2019

We attended PAG XXVII, the largest Ag-Genomics Meeting in the world. https://www.intlpag.org/30/ We launched OmicsBox Beta and gave away a whole bunch of free subscriptions. Here are a few pics of the happy winners! Hopefully, they took advantage. The PAG 2019 Team with our new OmcisBox Booth :-). See you next year!

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new version 5

Release Version 5

Release Date: 13/01/2018) Just in time for the PAG Plant & Animal Genome Conference, we launched Blast2GO 5! This major release brings many new features. Most importantly, Blast2GO is now connected to the powerful BioBam Cloud, an AWS  architecture which gives a big boost to many analysis steps. Details below.  To upgrade from version 4 to 5 you have to

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New Blast2GO Version 3.3

Major Release Version 4

(Release Date: 13/09/2016) We are very happy to announce the release of Blast2GO 4. This new version contains many new bioinformatic features like Differential Expression Analysis, Gene Finding or Gene Set Enrichment Analysis. Blast2GO will update automatically if activated. Otherwise please download the latest version online from here. Feedback, questions, as well as feature requests, are most welcome. Please write

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Functional Analysis of Pancreatic Cancer Expression Profiles

This use case shows how to perform a functional analysis of pancreatic cancer expression data with Blast2GO. The performed steps are explained more in detail with short video tutorial linked to each section. Malignant (PDAC), benign (CP) and normal tissue (NP) gene lists are compared against each other. The human genome functional annotation data is retrieved via BioMart and used

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Project statistics

Analysis Progress Chart

How to know if all your sequences have been analyzed The Analysis Progress chart is a very useful representation, which shows the step of the analysis in which the sequences in your dataset are found. They can be in different states, each represented by a color: Total: grey Without Analysis: white With IPS: purple With Blast Hits: orange Without Blast

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